Wave Life Sciences Ltd. · NASDAQ:WVE

Wave Life Sciences — Investor Presentation (June 2021)

65 slides from Wave Life Sciences's investor presentation, Jun 2, 2021

  1. Slide 1: Wave Life Sciences Corporate Presentation

    Wave Life Sciences Corporate Presentation June 2, 2021 Exhibit 99.2

  2. Slide 2: Forward-looking statements

    Forward-looking statements This document contains forward-looking statements. All statements other than statements of historical facts contained in this document, including statements regarding possible or assumed future results of operations, preclinical and clinical studies, business strategies, r

  3. Slide 3: Building a leading genetic medicines company

    Building a leading genetic medicines company ALS: Amyotrophic lateral sclerosis; FTD: Frontotemporal dementia 1stereopure oligonucleotides and novel backbone chemistry modifications Innovative platform Stereopure oligonucleotides Novel backbone modifications (PN chemistry) Allele-selectivity Multipl

  4. Slide 4: PRISM has unlocked novel and proprietary advances in oligonucleotide design

    PRISM has unlocked novel and proprietary advances in oligonucleotide design Backbone modifications Sugar modifications Drug approvals (FDA)2 1975 2020 2000 Mixtures of 2n molecules1 ~500,000 different molecules per dose fomivirsen pegaptanib Phosphorothioate (PS) mipomersen nusinersen PN backbone ch

  5. Slide 5: Innovative pipeline led by neurology programs

    THERAPEUTIC AREA / TARGET DISCOVERY PRECLINICAL CLINICAL PARTNER ALS and FTD C9orf72 Takeda 50:50 option Huntington’s disease mHTT SNP3 SCA3 ATXN3 CNS diseases Multiple† Takeda milestones & royalties DMD Exon 53 100% global ADAR editing Multiple AATD (ADAR editing) SERPINA1 100% global Retinal disea

  6. Slide 6: Platform evolution reflected in clinical pipeline

    Platform evolution reflected in clinical pipeline Variant-selective silencing candidate in ALS and FTD WVE-004 C9orf72 WVE-003 SNP3 Allele-selective silencing candidate in HD WVE-N531 Exon 53 Exon skipping candidate in DMD HD: Huntington’s diseaseALS: amyotrophic lateral sclerosisFTD: frontotemporal

  7. Slide 7: WVE-004 ALS and FTD

    WVE-004 Amyotrophic Lateral Sclerosis (ALS) Frontotemporal Dementia (FTD)

  8. Slide 8: C9orf72 repeat expansions: common genetic causes of ALS and FTD

    C9orf72 repeat expansions: One of the most common genetic causes of ALS and FTD Typically 100’s-1000’s of GGGGCC repeats Amyotrophic Lateral Sclerosis (ALS) Frontotemporal Dementia (FTD) Hexanucleotide (G4C2)- repeat expansions in C9orf72 gene are common autosomal dominate cause for ALS and FTD Diff

  9. Slide 9: C9orf72 repeat expansions: Mechanisms of cellular toxicity

    C9orf72 repeat expansions: Mechanisms of cellular toxicity C9-ALS and C9-FTD may be caused by multiple factors: Insufficient levels of C9orf72 protein Accumulation of repeat-containing RNA transcripts Accumulation of aberrantly translated DPR proteins Recent evidence suggests lowering C9orf72 protei

  10. Slide 10: C9orf72 targeting strategy spares C9orf72 protein

    Normal C9orf72 allele produces three mRNA transcripts (~80% are V2, ~20% are V1 and V3) Pathological allele with expanded repeat leads to healthy V2 and pathological V1 and V3 transcript by-products C9orf72 targeting strategy spares C9orf72 protein WVE-004 targets only V1 and V3 transcripts, sparing

  11. Slide 11: PN backbone chemistry: improved potency among C9orf72-targeting oligonucleotides in vivo

    PN backbone chemistry modifications: Improved potency among C9orf72-targeting oligonucleotides in vivo Exposure (µg/g) Exposure (µg/g) C9orf72 compounds Spinal cord Cortex PS/PO backbone PS/PO/PN backbone %C9orf72 V3 transcript remaining Mice received 2 x 50 ug ICV doses on days 0 & 7; mRNA from spi

  12. Slide 12: WVE-004: Potent and selective knockdown in vitro

    WVE-004: Potent and selective knockdown of repeat-containing transcripts in vitro V3 Dose (μM) All V WVE-004 NTC Dose (μM) In vitro activity in C9 patient-derived neurons WVE-004 NTC Dose (μM) IC50:201.7nM In vitro selectivity in C9 patient-derived neurons C9 patient-derived motor neurons were treat

  13. Slide 13: WVE-004 demonstrates durable reduction of DPRs in vivo

    WVE-004 demonstrates durable reduction of DPRs in vivo after 6 months in spinal cord and cortex Spinal cord Cortex Full results presented at the 31st International Symposium on ALS/ MND (December 2020) Top: 2 x 50 ug (day 0, day 7) dosed ICV; DPRs measured by Poly-GP MSD assay. *: p≤ 0.05 **: P ≤ 0.

  14. Slide 14: FOCUS-C9 adaptive trial design

    Single-ascending dose (SAD) Multi-ascending dose (MAD) Phase 1b/2a global, multicenter, randomized, double-blind, placebo-controlled trial Dose escalation and MAD dosing frequency guided by independent committee Safety and tolerability Primary objectives Plasma and CSF PK profile PolyGP in CSF Secon

  15. Slide 15: WVE-003 Huntington's Disease

    WVE-003 Huntington’s Disease

  16. Slide 16: Huntington's disease: mHTT toxicity and loss of wtHTT functions

    Healthy individual Huntington’s disease mHTT toxic effects lead to neurodegeneration, loss of wtHTT functions may also contribute to HD Wild-type HTT is critical for normal neuronal function Expanded CAG triplet repeat in HTT gene results in production of mutant huntingtin protein Huntington’s disea

  17. Slide 17: Wild-type HTT is a critical protein for CNS functions

    Plays an essential role in the transport of synaptic proteins—including neurotransmitters and receptors—to their correct location at synapses9-12 Promotes neuronal survival by protecting against stress (e.g., excitotoxicity, oxidative stress, toxic mHTT aggregates)1-8 BRAIN CIRCUITS SYNAPSE NEURON C

  18. Slide 18: HTT provides BDNF critical for striatal neuron survival

    Cerebral cortex Striatum BDNF- containing vesicle To the striatum Microtubule HTT HTT provides BDNF, a growth factor critical for survival of striatal neurons BDNF, brain-derived neurotrophic factor; HD, Huntington’s disease; HTT, huntingtin protein. 1. Altar CA, Cai N, Bliven T, et al. Nature. 1997

  19. Slide 19: Allele-selective approach to treating HD

    Target mutant mRNA HTT transcript to reduce mutant HTT protein Preserve wild-type HTT protein reservoir in brain Allele-selective approach to treating HD Wave has only allele-selective clinical program in Huntington’s disease Only an allele-selective approach is designed to address both toxic gain o

  20. Slide 20: Allele-selective approach to treating HD: patient population

    Allele-selective approach to treating HD Neuro HD 1 Claassen et al. Neurol Genet Jun 2020; Carroll et al. Mol Ther. 2011 Dec; HDSA.org : 2000 patients ~30,000 people with manifest HD in US ~40% of HD Patients Carry SNP3 Allele-selective Treatments Have Potential to Benefit Many of Those At-risk of H

  21. Slide 21: Nature publication on importance of wild-type huntingtin

    Nature publication contributes to weight of evidence on importance of wild-type huntingtin Source: Poplawski et al., Nature, April 2019 Htt: Huntingtin protein Conditional knock-out of Htt in 4-month old mice (post-neuronal development) Results suggest that: Htt plays a central role in the regenerat

  22. Slide 22: WVE-003 selective, potent, durable reduction of mHTT preclinically

    WVE-003 (SNP3) demonstrates selective, potent, and durable reduction of mHTT in preclinical models Selectively reduces mHTT mRNA in HD iPSC neurons in vitro Results from ND50036 iPSC-derived medium spiny neurons. Total HTT knockdown quantified by qPCR and normalized to HPRT1 Oligonucleotide or PBS [

  23. Slide 23: WVE-003 distribution to cortex and striatum in BACHD and NHPs

    WVE-003: In vivo studies support distribution to cortex and striatum in BACHD and NHPs PK: pharmacokinetic PD: pharmacodynamic IC50: the concentration of observed half of the maximal effect mHTT: mutant huntingtin protein Achieved sufficient concentrations of WVE-003 in cortex and striatum for targe

  24. Slide 24: SELECT-HD adaptive trial design

    Single-ascending dose (SAD) Multi-ascending dose (MAD) Day 1-3 15 29 57 85 Dose q Biomarker Samples l l l l l Clinical Evaluations l l Week 1 2 4 8 12 16 20 24 q q q q q l l l l l l l l l l l SELECT-HD: Adaptive trial designed to enable faster optimization of dose and frequency Adaptive cohorts Phas

  25. Slide 25: Assessment of wild-type protein in CSF

    Neuro HD Assessment of wild-type protein in CSF Ab: antibodyCSF: cerebrospinal fluidHTT: huntingtin proteinMW1: Wild et al. JCI 2015 CSF sample Total HTT mt wt wt wt mt mt mt mt mt wt wt wt Wild-type HTT wt wt wt wt wt wt wt wt Deplete mutant HTT Add polyQ Ab magnetic beads to CSF sample mt mt mt mt

  26. Slide 26: WVE-N531 Duchenne muscular dystrophy

    WVE-N531 Duchenne muscular dystrophy

  27. Slide 27: WVE-N531 in vitro dose-dependent dystrophin restoration

    WVE-N531 in vitro dose-dependent dystrophin restoration WVE-N531 contains novel PN backbone chemistry modifications Free uptake for 6 days in differentiation media with no transfection agent and no peptide conjugated to the oligonucleotide Demonstrated a dose-dependent increase in dystrophin restora

  28. Slide 28: PN chemistry led to overall survival benefit in dKO model

    PN chemistry led to overall survival benefit in dKO model dKO; double knockout mice lack dystrophin and utrophin protein. mdx mice lack dystrophin. Left: Mice with severe disease were euthanized. dKO: PS/PO/PN 150 mg/kg n= 8 (p=0.0018); PS/PO/PN 75 mg/kg n=9 (p=0.00005); PS/PO n=9 (p=0.0024), PBS n=

  29. Slide 29: Clinical trial of WVE-N531 to initiate in 2021

    Clinical trial of WVE-N531 to initiate in 2021 Unmet need in DMD remains high CTA submitted in March 2021 to initiate clinical development Clinical trial powered to evaluate change in dystrophin production, and will assess drug concentration in muscle, and initial safety Open-label study; targeting

  30. Slide 30: Wave's discovery and drug development platform

    Wave’s discovery and drug development platform

  31. Slide 31: Rational drug design: Evolution of PRISM platform

    Silencing & splicing capabilities PN backbone chemistry modifications In vivo target engagement, including NHP ADAR editing capability Learnings of first-generation programs Establish PK/PD and toxicology relationships Novel in vivo models Stereopure oligonucleotides Rational drug design: Evolution

  32. Slide 32: Design principles deployed across programs

    Through iterative analysis of in vitro and in vivo outcomes and machine learning-driven predictive modeling, Wave continues to define design principles that are deployed across programs to rapidly develop and manufacture clinical candidates that meet pre-defined product profiles Multiple modalities

  33. Slide 33: PRISM platform enables rational drug design

    Sequence Stereochemistry Chemistry PRISM platform enables rational drug design Chemistry R: 2’ modifications OMe, MOE, F, other modifications 5’ 2’ 3’ 5’ 3’ 2’ R X B B X: backbone chemistry Phosphodiester (PO), phosphorothioate (PS), Phosphoramidate diester (PN) Sequence B: bases A, T, C, mC, G, U,

  34. Slide 34: PRISM backbone modifications

    Backbone modification (X) Phosphodiester Phosphorothioate Phosphoramidate diester Stereochemistry Not chiral Chiral Chiral Charge Negative Negative Neutral Depiction PRISM backbone modifications Expanding repertoire of backbone modifications with novel PN backbone chemistry Molecule structure illust

  35. Slide 35: PN chemistry increases potency in silencing, splicing, and editing

    Silencing PN chemistry increases potency in silencing, splicing, and editing preclinical studies Improved knockdown Splicing Editing Improved skipping Ranked by potency of reference PS/PO compound Ranked by potency of reference PS/PO compound Improved editing PS/PO/PN PS/PO (Stereopure) PS/PO (Stere

  36. Slide 36: Lead program in Takeda collaboration reinforces potential of PN chemistry

    Lead program in Takeda collaboration reinforces potential of PN chemistry in the CNS Single IT dose of 12 mg (n=3) Therapeutic candidate widely distributed across brain and spinal cord ~90% mRNA knockdown one-month following single dose Substantial and widespread target mRNA reduction following sing

  37. Slide 37: PRISM enables optimal placement of backbone stereochemistry

    PRISM enables optimal placement of backbone stereochemistry Crystal structure confirms phosphate-binding pocket of RNase H binds 3’-SSR-5’ motif in stereopure oligonucleotide – supports design strategy for Wave oligonucleotides ASO/RNA duplex Yellow spheres represent ‘S’ atoms Phosphate binding pock

  38. Slide 38: Importance of controlling stereochemistry

    Importance of controlling stereochemistry (Rp) (Sp) Top view Side view Yellow spheres represent ‘S’ atomsPS: Phosphorothioate Number of PS linkages in oligonucleotide backbone No. diastereomers 80T 60T 40T 20T 30B 22M 12M 2M 1M 500K 0 0 10 20 30 40 50 Antisense, exon skipping, ssRNAi ADAR oligonucle

  39. Slide 39: ADAR editing: Platform capability and Alpha-1 antitrypsin deficiency

    ADAR editing Platform capability and Alpha-1 antitrypsin deficiency

  40. Slide 40: PRISM platform has unlocked ADAR editing

    PRISM platform has unlocked ADAR editing A-to-I editing is one of most common post-transcriptional modifications ADAR is ubiquitously expressed across tissues, including liver and CNS ADAR Target RNA I(G) A Edited RNA Oligonucleotide establishes double-stranded RNA complex Oligonucleotide Modificati

  41. Slide 41: PRISM enables RNA editing without viruses or exogenous protein

    PRISM enables practical approach to RNA editing without need for viruses or exogenous protein Intracellular Extracellular space Endogenous ADAR Unedited RNA Wave ADAR-editing Oligonucleotides Exogenous ADAR or other base editors Edited RNA Protein release/ expression Delivery vehicles Alternative Ba

  42. Slide 42: Advantages of Wave ADAR editing platform

    Wave platform Fully chemically modified to increase stability in vivo Chirally-controlled backbone to maximize in vitro activity PN backbone chemistry modification improves editing efficiency No requirement for AAV / nanoparticles GalNAc-conjugated for targeted delivery into liver Avoids permanent o

  43. Slide 43: ADAR amenable diseases represent a sizeable opportunity

    ADAR amenable diseases represent a sizeable opportunity Nearly half of known human SNPs associated with disease are G-to-A mutations A-to-I(G) editing could target tens of thousands of potential disease variants1 ~48% C-to-T C-to-G A-to-T C-to-A A-to-C A-to-G Potentially pathogenic human SNPs by bas

  44. Slide 44: RNA editing opens many new therapeutic applications

    RNA editing opens many new therapeutic applications Fix nonsense and missense mutations that cannot be splice-corrected​ Remove stop mutations​ Prevent protein misfolding and aggregation Alter protein processing (e.g. protease cleavage sites) Protein-protein interactions domains Modulate signaling p

  45. Slide 45: ADAR editing in NHP and primary human hepatocytes

    Significant ADAR editing demonstrated in vitro in NHP and primary human hepatocytes NHP: non-human primate; ACTB: Beta-actin; nd= not determined Total RNA was harvested, reverse transcribed to generate cDNA, and the editing target site was amplified by PCR. In vitro dose-response human hepatocytes I

  46. Slide 46: Efficient ADAR editing in vivo in non-human primate

    Efficient ADAR editing translated in vivo in non-human primate study NHP: non-human primate; ACTB: Beta-actin; Left: 5mg/kg SC: Day 1,2,3,4,5; Liver Biopsy for mRNA (ACTB Editing) & eASO Exposure: Day 7 Up to 50% editing efficiency observed at Day 7, 2 days post last dose Substantial and durable edi

  47. Slide 47: Wave ADAR editing oligonucleotides are highly specific

    Editing site RNA editing within ACTB transcript (human hepatocytes) RNA editing within transcriptome (human hepatocytes) Wave ADAR editing oligonucleotides are highly specific Coverage Genome coordinates ACTB C 0% T 100% C 53.8% T 46.2% ACTB Confidence (LOD score) % Editing Mock Editing oligonucleot

  48. Slide 48: Multiple opportunities for ADAR editing in neurology

    Multiple opportunities for ADAR editing in neurology ACTB editing in iCell Neurons ACTB editing in human iCell Astrocytes Concentration (µM) % Editing % Editing Compound 2 (PS / PN) Compound 1 (PS / PN) Compound 3 (PS / PN) EC50: ~200-250nM Gymnotic uptake; Total RNA was harvested, reverse transcrib

  49. Slide 49: ADAR editing approach to correct alpha-1 antitrypsin deficiency

    An ADAR editing approach to correct alpha-1 antitrypsin deficiency Correct Z allele mRNA to healthy M allele Most common cause is mutation in SERPINA1 Z allele (PI*ZZ) Z-AAT misfolded protein prone to aggregation Restores circulating, lung-bound M-AAT M-AAT Wild-type AAT protein Secretion into blood

  50. Slide 50: SERPINA1 Z allele mRNA editing restores M-AAT in vitro

    3-Fold Increase SERPINA1 Z allele mRNA editing restores wild-type M-AAT protein concentration in vitro AAT (alpha-1 anti-trypsin); Mouse primary hepatocytes that express SERPINA1 Z allele mRNA were transfected with 25 nanomolar (nM) of SERPINA1 (SA1-1 and SA1-2) targeting antisense oligonucleotides

  51. Slide 51: First proof-of-concept study to restore M-AAT with ADAR editing in vivo

    First proof-of-concept study to restore M-AAT protein with ADAR editing in vivo SERPINA1-Pi*Z/huADAR Genotype Pathology ü huADAR Liver pathology, Z-AAT protein in serum and liver ü huSERPINA1-Pi*Z Goals of first in vivo proof-of-concept study: Editing of SERPINA1 Z allele mRNA in liver to approach h

  52. Slide 52: Achieving 40% editing of Z allele mRNA

    Achieving 40% editing of Z allele mRNA at single timepoint SA1 - 3 SA1 - 4 SERPINA1 Z allele mRNA editing levels nearing correction to heterozygote (MZ) AAT protein increase Wild-type M-AAT functional Z allele mRNA editing in vivo GalNAc-conjugated compounds Up to 40% editing of Z allele mRNA in liv

  53. Slide 53: Achieving therapeutically meaningful increases in circulating human AAT

    Statistics (ELISA): Matched 2-way ANOVA with correction for multiple comparisons (Bonferroni) was used to test for differences in AAT abundance in treated samples compared to PBS Statistics; de Serres et al., J Intern Med. 2014; NTC: non-targeting control AAT protein increase Wild-type M-AAT functio

  54. Slide 54: Restoring circulating wild-type M-AAT

    75% wild-type M-AAT Serum Z-AAT AAT protein increase Wild-type M-AAT Z allele mRNA editing in vivo Human AAT isoforms in serum Mass spectrometry ADAR editing restores wild-type M-AAT, suggesting reduction of Z-AAT in liver and serum AATD Restoring circulating wild-type M-AAT

  55. Slide 55: Secreted wild-type M-AAT protein is functional

    (Elastase inhibition): Matched 2-way ANOVA with correction for multiple comparisons (Bonferroni) was used to test for differences in elastase inhibition activity in serum collected at day 7 vs pre-dose for each treatment group; NTC: non-targeting control AAT protein increase Wild-type M-AAT function

  56. Slide 56: ADAR editing corrects Z allele mRNA in vivo to restore functional M-AAT

    ADAR editing successfully corrects Z allele mRNA in vivo to restore functional M-AAT protein Results support use of human transgenic mouse model to evaluate ADAR editing compounds for additional targets Up to 40% editing of SERPINA1 Z allele mRNA in liver at single timepoint, nearing correction to h

  57. Slide 57: Ophthalmology

    Ophthalmology

  58. Slide 58: Stereopure oligonucleotides for inherited retinal diseases

    Stereopure oligonucleotides for inherited retinal diseases (IRDs) Wave ophthalmology opportunity Oligonucleotides can be administered by intravitreal (IVT) injection; targeting twice per year dosing Stereopure oligonucleotides open novel strategies in both dominant and recessive IRDs; potential for

  59. Slide 59: Durable Malat1 knockdown with PN backbone chemistry modifications

    Durable Malat1 knockdown through 9 months with PN backbone chemistry modifications Compound or PBS (1 x 50 ug IVT) was delivered to C57BL6 mice. Relative percentage of Malat1 RNA in the posterior of the eye (retina, choroid, sclera) to PBS-treated mice is shown at 12, 20 and 36 weeks post-single inj

  60. Slide 60: Usher Syndrome Type 2A: a progressive vision loss disorder

    Usher Syndrome Type 2A: a progressive vision loss disorder Autosomal recessive disease characterized by hearing loss at birth and progressive vision loss beginning in adolescence or adulthood Caused by mutations in USH2A gene (72 exons) that disrupt production of usherin protein in retina, leading t

  61. Slide 61: Potent USH2A exon skipping with stereopure compound

    Potent USH2A exon 13 skipping with stereopure compound in vitro and ex vivo Oligonucleotides were added to Y79 cells under free-uptake conditions. Exon skipping was evaluated by Taqman assays. USH2A transcripts were normalized to SRSF9. Data are mean±s.d., n=2. Stereorandom: Compound identified in v

  62. Slide 62: Stereopure oligonucleotide elicits dose-dependent exon skipping in NHP eye

    Stereopure oligonucleotide elicits dose-dependent exon skipping in NHP eye in vivo Oligonucleotide is complementary to NHP USH2A exon 12* Evaluated 1-week post-single IVT injection Dose-dependent activity of stereopure oligonucleotides Substantial exposure in retina Exon-skipping integrity confirmed

  63. Slide 63: Allele-selective reduction of SNP-containing allele for adRP (Rhodopsin P23H)

    Allele-selective reduction of SNP-containing allele for adRP associated with Rhodopsin P23H mutation Left: Reporter assays on a sequence described in WO2016138353A1. Oligonucleotide and luciferase reporter plasmids (wild-type and mutant RHO) are transfected into Cos7 cells. Cells are harvested after

  64. Slide 64: Rapid path to clinical proof of concept

    Validation of humanized mouse model in 1H 2021 WVE-004: Dose first patient in FOCUS-C9 trial for patients with ALS/FTD in 2021 Continuous flow of data to enable program decisions through 2022 WVE-003: Dose first patient in SELECT-HD trial for patients with HD in 2021 WVE-N531: Dose first patient in

  65. Slide 65: Realizing a brighter future for people affected by genetic diseases

    Realizing a brighter future for people affected by genetic diseases For more information: Kate Rausch, Investor Relations krausch@wavelifesci.com 617.949.4827

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