Illumina, Inc.NASDAQ: ILMN

Standard BioTools Reports Third Quarter 2025 Financial Results

SOUTH SAN FRANCISCO, Calif., Nov. 04, 2025 (GLOBE NEWSWIRE) -- Standard BioTools Inc. (NASDAQ: LAB) (the “Company” or “Standard BioTools”) today announced financial results for the quarter ended September 30, 2025.

Recent Highlights:

  • Third quarter 2025 total combined company revenue of $46.2 million; Revenue from continuing operations of $19.6 million

  • Implemented restructuring plan expected to deliver over $40 million in annualized cost savings; On track to achieve positive adjusted EBITDA target in 2026

  • $217.0 million in cash & cash equivalents as of September 30, 2025; Approximately $550 million in cash & cash equivalents expected at close of transaction with Illumina in first half of 2026 to fuel inorganic growth strategy

“The third quarter marked another period of solid execution as we sharpen our focus and position Standard BioTools for the next stage,” said Michael Egholm, PhD, President and Chief Executive Officer of Standard BioTools. “Our commercial team delivered consistent overall performance amid a still-evolving macro environment, and with cost savings initiatives beginning to take hold, we are simplifying operations, increasing productivity and driving the go-forward business toward profitability expected in 2026. Combined with a strong balance sheet at quarter end and the significant cash injection expected from the pending Illumina transaction, we are well positioned to expand our portfolio through strategic M&A that we believe will fuel growth and deliver long-term value for our shareholders.”

Operational Restructuring

In September, as previously disclosed in the Company’s SEC filings, the Company implemented a phased operational restructuring plan expected to deliver over $40 million in total annualized cost savings, to be fully realized in 2026. The plan included an aggregate reduction-in-force of approximately 20% of its global workforce as well as initiatives designed to increase operating efficiency, reduce costs, and align resources with the Company’s long-term strategic objectives. These actions reinforce the Company’s path to generating positive adjusted EBITDA expected in 2026.

“Given the current operating environment, these decisions were important to keep our organization lean, focused and positioned to emerge stronger tomorrow than we are today,” said Alex Kim, Chief Financial Officer of Standard BioTools. “I want to sincerely thank our departing colleagues for their contributions as we take these steps to secure the long-term success of Standard BioTools – delivering innovative solutions to our customers as they advance science and improve human health.”

The cost savings initiative, together with the continued application of the Standard BioTools Business System (SBS), is expected to generate efficiencies across sales and marketing, research and development, and general and administrative functions. As previously announced, Standard BioTools will consolidate its South San Francisco operations into its Singapore facility, co-locating research and development with manufacturing. As part of this transition, the Company also plans to establish its global headquarters in Boston.

Financial Results Table: Continuing Operations

Three Months Ended
September 30,

Nine Months Ended
September 30,

(Unaudited, in millions, except percentages)

2025

2024

2025

2024

Revenue

$

19.6

$

22.1

$

61.5

$

66.2

Gross margin

48.5

%

54.9

%

50.6

%

50.6

%

Non-GAAP gross margin

53.5

%

57.3

%

54.9

%

55.2

%

Operating expenses

$

42.4

$

38.8

$

116.8

$

134.9

Non-GAAP operating expenses

$

27.0

$

26.3

$

80.5

$

84.5

Operating loss

$

(32.9

)

$

(26.7

)

$

(85.6

)

$

(101.4

)

Net loss from continuing operations

$

(31.7

)

$

(21.9

)

$

(72.7

)

$

(63.8

)

Adjusted EBITDA

$

(16.5

)

$

(13.7

)

$

(46.8

)

$

(48.0

)

Cash, cash equivalents, restricted cash, short-term and long-term investments

$

217.0

$

338.1

$

217.0

$

338.1


Third Quarter 2025 Financial Results: Continuing Operations

Following the announced sale of SomaLogic, Inc. (“SomaLogic”) and other specified assets to Illumina, Inc. (“Illumina”) in June 2025, all financial results in this section reflect continuing operations only.

  • Revenue was $19.6 million in the third quarter of 2025, down 11% year-over-year.

    • Consumables revenue was $8.7 million in the third quarter of 2025, down 17% year-over-year. Lower consumables revenue in the quarter reflected project funding declines in flow and microfluidics, partially offset by growth in imaging.

    • Instruments revenue was $5.1 million in the third quarter of 2025, down 3% year-over-year. Instrument revenue in the quarter reflected growth in imaging but overall remained impacted by capital-constrained end-markets globally.

    • Services revenue, which is predominantly Field Services, was $5.8 million in the third quarter of 2025, down 9% year-over-year. Field Services revenue decreased due to fewer active service contracts and lower on-demand revenue driven by improved instrument quality and uptime.

  • Gross margins in the third quarter of 2025 were approximately 48.5%, versus 54.9% in the third quarter of 2024; and non-GAAP gross margins in the third quarter of 2025 were approximately 53.5%, versus 57.3% in the third quarter of 2024. Gross margins and non-GAAP gross margins were driven by volume and product mix.

  • Operating expenses in the third quarter of 2025 were $42.4 million, an increase of $3.6 million, or up 9%, compared to the third quarter of 2024. Operating expenses included $9.4 million in restructuring and related charges. Non-GAAP operating expenses, which exclude transaction costs, stock-based compensation, and restructuring charges, were $27.0 million in the third quarter of 2025, an increase of $0.7 million, or up 3%, compared to the third quarter of 2024. The increase in operating expenses is due to the reclassification of SomaLogic as discontinued operations and the retention of shared corporate costs within continuing operations, more than offsetting lower R&D expenses and continued productivity gains from SBS.

  • Net loss for the third quarter of 2025 was $31.7 million, compared to a net loss of $21.9 million in the third quarter of 2024, representing an increase of $9.8 million or 45%, while adjusted EBITDA for the third quarter of 2025 was a loss of $16.5 million, versus an adjusted EBITDA loss of $13.7 million in the third quarter of 2024, an increase of $2.9 million, or 21%.

Full Year 2025 Revenue Outlook

For fiscal year 2025, the Company continues to expect combined revenue in the range of $165 million to $175 million. Revenue from continuing operations is expected to be in the range of $78 million to $83 million.

Use of Non-GAAP Financial Information

Standard BioTools has presented certain financial information in accordance with U.S. GAAP and on a non-GAAP basis. The non-GAAP financial measures included in this press release are non-GAAP gross margin, non-GAAP gross profit, non-GAAP operating expenses, and adjusted EBITDA. Management uses these non-GAAP financial measures, in addition to GAAP financial measures, as a measure of operating performance because the non-GAAP financial measures do not include the impact of items that management does not consider indicative of the Company’s core operating performance. Management believes that non-GAAP financial measures, taken in conjunction with GAAP financial measures, provide useful information for both management and investors by excluding certain non-cash and other expenses that are not indicative of the Company’s core operating results. Management uses non-GAAP measures to compare the Company’s performance relative to forecasts and strategic plans and to benchmark the Company’s performance externally against competitors. Non-GAAP information is not prepared under a comprehensive set of accounting rules and should only be used to supplement an understanding of the Company’s operating results as reported under U.S. GAAP. Standard BioTools encourages investors to carefully consider its results under GAAP, as well as its supplemental non-GAAP information and the reconciliations between these presentations, to more fully understand its business. Reconciliations between GAAP and non-GAAP operating results are presented in the accompanying tables of this release.

Forward-Looking Statements

This press release contains forward-looking statements within the meaning of the Private Securities Litigation Reform Act of 1995, including, among others, statements regarding future financial and business performance, including with respect to future revenue and expected cash at the closing of the transaction with Illumina; operational and strategic plans, including potential cost savings from the operational restructuring plan and the timing for realizing such cost savings; deployment of capital; market and growth opportunity and potential; and the potential to realize the expected benefits and synergies of prior and potential future acquisitions, including the potential for such transactions to drive long-term profitable growth. Forward-looking statements are subject to numerous risks and uncertainties that could cause actual results to differ materially from currently anticipated results, including, but not limited to, risks that the anticipated benefits and synergies of announced divestures and prior and potential future acquisitions and the integration of any such businesses, including the potential for such transactions to drive long-term profitable growth, may not be fully realized or may take longer to realize than expected; risks that the Company may not realize expected cost savings from such transactions; possible integration, restructuring and transition-related disruption resulting from such transactions, including through the loss of customers, suppliers, and employees and adverse impacts on the Company’s development activities and results of operation; the timing of the closing of the transaction with Illumina and the operating expenses over the intervening period; integration and restructuring activities, including customer and employee relations, management distraction, and reduced operating performance; risks that internal and external costs required for ongoing and planned activities may be higher than expected, which may cause the Company to use cash more quickly than it expects or change or curtail some of the Company’s plans, or both; risks that the Company’s expectations as to expenses, cash usage, and cash needs may prove not to be correct for other reasons such as changes in plans or actual events being different than our assumptions; changes in the Company’s business or external market conditions; anticipated NIH funding pressures; the expected effect from U.S. export controls and the expected impact from tariffs; challenges inherent in developing, manufacturing, launching, marketing, and selling new products; interruptions or delays in the supply of components or materials for, or manufacturing of, the Company’s products; reliance on sales of capital equipment for a significant proportion of revenues in each quarter; seasonal variations in customer operations; unanticipated increases in costs or expenses; continued or sustained budgetary, inflationary, or recessionary pressures; uncertainties in contractual relationships; reductions in research and development spending or changes in budget priorities by customers; uncertainties relating to the Company’s research and development activities, and distribution plans and capabilities; potential product performance and quality issues; risks associated with international operations; intellectual property risks; and competition. For information regarding other related risks, see the “Risk Factors” section of the Company’s annual report on Form 10-K, for the year ended December 31, 2024, filed with the SEC on March 11, 2025, the Company’s quarterly report on Form 10-Q for the quarter ended June 30, 2025, filed with the SEC on August 15, 2025, and in the Company’s other filings with the SEC. These forward-looking statements speak only as of the date hereof. The Company disclaims any obligation to update these forward-looking statements except as may be required by law.

About Standard BioTools Inc.

Standard BioTools Inc. (Nasdaq: LAB), has an established portfolio of essential, standardized next-generation technologies that help biomedical researchers develop better medicines faster. As a leading solutions provider, the company provides reliable and repeatable insights in health and disease using its proprietary SomaScan, mass cytometry and microfluidics technologies, which help transform scientific discoveries into better patient outcomes. Standard BioTools works with leading academic, government, pharmaceutical, biotechnology, plant and animal research and clinical laboratories worldwide, focusing on the most pressing needs in translational and clinical research, including oncology, immunology and immunotherapy. Learn more at standardbio.com or connect with us on X, Facebook®, LinkedIn, and YouTube™.

For Research Use Only. Not for use in diagnostic procedures.

Limited Use Label License and other terms may apply: standardbio.com/legal/salesterms.
Patent and License Information: standardbio.com/legal/notices.
Trademarks: standardbio.com/legal/trademarks. Any other trademarks are the sole property of their respective owners. ©2025 Standard BioTools Inc. (f.k.a. Fluidigm Corporation). All rights reserved.

Investor Contact:
ir@standardbio.com

STANDARD BIOTOOLS INC.
CONDENSED CONSOLIDATED STATEMENTS OF OPERATIONS
Continuing Operations
(In thousands, except per share amounts)
(Unaudited)

Three Months Ended
September 30,

Nine Months Ended
September 30,

2025

2024

2025

2024

Revenue:

Product revenue

$

13,800

$

15,779

$

44,254

$

46,987

Services and other revenue

5,752

6,307

17,282

19,244

Total revenue

19,552

22,086

61,536

66,231

Cost of revenue:

Cost of product revenue

6,728

6,159

20,767

21,775

Cost of services and other revenue

3,340

3,801

9,608

10,930

Total cost of revenue

10,068

9,960

30,375

32,705

Gross profit

9,484

12,126

31,161

33,526

Operating expenses:

Research and development

6,356

6,939

18,018

21,791

Selling, general and administrative

26,595

24,466

84,524

75,740

Restructuring and related charges

9,428

2,341

12,707

12,374

Transaction and integration expenses

43

5,079

1,517

25,024

Total operating expenses

42,422

38,825

116,766

134,929

Loss from continuing operations

(32,938

)

(26,699

)

(85,605

)

(101,403

)

Bargain purchase gain

—

—

—

25,213

Interest income

2,140

4,794

7,517

16,303

Interest expense

(10

)

(853

)

(21

)

(2,744

)

Other income (expense), net

(2,092

)

957

3,438

(865

)

Loss from continuing operations before income taxes

(32,900

)

(21,801

)

(74,671

)

(63,496

)

Income tax benefit (expense)

1,216

(118

)

1,944

(270

)

Net loss from continuing operations

(31,684

)

(21,919

)

(72,727

)

(63,766

)

Discontinued operations:

Loss from discontinued operations, net of tax

(3,003

)

(5,019

)

(21,452

)

(41,047

)

Net loss

(34,687

)

(26,938

)

(94,179

)

(104,813

)

Induced conversion of redeemable preferred stock

—

—

—

(46,014

)

Net loss attributable to common stockholders

$

(34,687

)

$

(26,938

)

$

(94,179

)

$

(150,827

)

Net loss per share from continuing operations, basic and diluted

$

(0.08

)

$

(0.06

)

$

(0.19

)

$

(0.32

)

Net loss per share from discontinued operations, basic and diluted

$

(0.01

)

$

(0.01

)

$

(0.06

)

$

(0.12

)

Net loss per share attributable to common stockholders, basic and diluted

$

(0.09

)

$

(0.07

)

$

(0.25

)

$

(0.44

)

Shares used in computing net loss per share attributable to common stockholders, basic and diluted

382,630

371,538

380,468

346,093

STANDARD BIOTOOLS INC.
CONDENSED CONSOLIDATED BALANCE SHEETS
Continuing Operations
(In thousands)
(Unaudited)

September 30,

December 31,

2025

2024

ASSETS

Current assets:

Cash and cash equivalents

$

129,418

$

166,728

Short-term investments

65,485

126,146

Accounts receivable, net

13,536

14,741

Inventory

25,418

20,744

Prepaid expenses and other current assets

7,906

4,561

Current assets held for sale

230,676

42,963

Total current assets

472,439

375,883

Property and equipment, net

20,738

22,775

Operating lease right-of-use asset, net

23,453

26,567

Other non-current assets

3,521

3,688

Long-term investments

19,485

—

Non-current assets held for sale

—

183,432

Total assets

$

539,636

$

612,345

LIABILITIES AND STOCKHOLDERS’ EQUITY

Current liabilities:

Accounts payable

$

6,619

$

5,049

Accrued liabilities

30,810

21,435

Operating lease liabilities, current

5,113

4,806

Deferred revenue, current

40,111

10,274

Deferred grant income, current

3,098

3,527

Current liabilities held for sale

22,214

20,804

Total current liabilities

107,965

65,895

Convertible notes, non-current

299

299

Deferred tax liability

1,139

1,081

Operating lease liabilities, non-current

21,977

25,590

Deferred revenue, non-current

2,366

32,674

Deferred grant income, non-current

5,031

7,243

Other non-current liabilities

1,200

1,062

Non-current liabilities held for sale

—

6,779

Total liabilities

139,977

140,623

Total stockholders’ equity

399,659

471,722

Total liabilities and stockholders’ equity

$

539,636

$

612,345

STANDARD BIOTOOLS INC.
CONDENSED CONSOLIDATED STATEMENTS OF CASH FLOWS
(In thousands)
(Unaudited)

Nine Months Ended September 30,

2025

2024

Operating activities

Net loss

$

(94,179

)

$

(104,813

)

Bargain purchase gain

—

(25,213

)

Stock-based compensation expense

23,870

24,262

Amortization of acquired intangible assets

1,715

3,533

Depreciation and amortization

7,971

9,375

Accretion of discount on short-term investments, net

(2,182

)

(6,303

)

Non-cash lease expense

4,435

4,348

Provision for excess and obsolete inventory

1,975

1,991

Change in fair value of warrants

(232

)

(474

)

Change in fair value of contingent consideration

(3,400

)

—

Other non-cash items

922

1,111

Changes in assets and liabilities, net

(14,048

)

(37,212

)

Net cash used in operating activities

(73,153

)

(129,395

)

Investing activities

Cash and restricted cash acquired in merger

—

280,033

Purchases of short-term investments

(91,241

)

(226,612

)

Purchases of long-term investments

(19,483

)

—

Proceeds from sales and maturities of investments

154,000

289,000

Purchases of property and equipment

(7,827

)

(4,973

)

Net cash provided by investing activities

35,449

337,448

Financing activities

Repayment of term loan and convertible notes

—

(8,192

)

Payment of term loan fee

—

(545

)

Repurchase of common stock

—

(40,490

)

Proceeds from ESPP stock issuance

308

425

Payments for taxes related to net share settlement of equity awards and other

(358

)

(414

)

Proceeds from exercise of stock options

—

1,120

Net cash provided by (used in) financing activities

(50

)

(48,096

)

Effect of foreign exchange rate fluctuations on cash and cash equivalents

942

(518

)

Net (decrease) increase in cash, cash equivalents and restricted cash

(36,812

)

159,439

Cash, cash equivalents and restricted cash at beginning of period

168,818

52,499

Cash, cash equivalents and restricted cash at end of period

$

132,006

$

211,938

Cash, cash equivalents, and restricted cash consists of:

Cash and cash equivalents

$

129,418

$

210,647

Restricted cash

2,588

1,291

Total cash, cash equivalents and restricted cash

$

132,006

$

211,938

STANDARD BIOTOOLS INC.
REVENUE
Continuing Operations
(In thousands)
(Unaudited)

Three Months Ended
September 30,

Nine Months Ended
September 30,

2025

2024

2025

2024

Product revenue:

Instruments

$

5,095

$

5,271

$

16,956

$

17,221

Consumables

8,705

10,508

27,298

29,766

Total product revenue

13,800

15,779

44,254

46,987

Services and other revenue

5,752

6,307

17,282

19,244

Total revenue

$

19,552

$

22,086

$

61,536

$

66,231

STANDARD BIOTOOLS INC.
RECONCILIATION OF GAAP TO NON-GAAP FINANCIAL INFORMATION
Continuing Operations
(In thousands)
(Unaudited)

ITEMIZED RECONCILIATION OF GROSS PROFIT TO NON-GAAP GROSS PROFIT AND MARGIN PERCENTAGE

Three Months Ended
September 30,

Nine Months Ended
September 30,

2025

2024

2025

2024

Gross profit

$

9,484

$

12,126

$

31,161

$

33,526

Amortization of acquired intangible assets

—

—

—

1,407

Depreciation and amortization

590

318

1,407

1,017

Stock-based compensation expense

386

218

1,030

601

Loss on disposal of property and equipment

—

—

187

—

Cost of sales adjustment

—

—

—

—

Non-GAAP gross profit

$

10,460

$

12,662

$

33,785

$

36,551

Gross margin percentage

48.5

%

54.9

%

50.6

%

50.6

%

Amortization of acquired intangible assets

—

—

—

2.2

%

Depreciation and amortization

3.0

%

1.4

%

2.3

%

1.5

%

Stock-based compensation expense

2.0

%

1.0

%

1.7

%

0.9

%

Loss on disposal of property and equipment

—

—

0.3

%

—

Cost of sales adjustment

—

—

—

—

Non-GAAP gross margin percentage

53.5

%

57.3

%

54.9

%

55.2

%

STANDARD BIOTOOLS INC.
RECONCILIATION OF GAAP TO NON-GAAP FINANCIAL INFORMATION
Continuing Operations
(In thousands)
(Unaudited)

ITEMIZED RECONCILIATION OF GAAP TO NON-GAAP OPERATING EXPENSES

Three Months Ended
September 30,

Nine Months Ended
September 30,

2025

2024

2025

2024

Operating expenses

$

42,422

$

38,825

$

116,766

$

134,929

Restructuring and related charges

(9,428

)

(2,341

)

(12,707

)

(12,374

)

Transaction and integration expenses

(43

)

(5,079

)

(1,517

)

(25,024

)

Stock-based compensation expense

(4,938

)

(4,431

)

(17,715

)

(11,026

)

Amortization of acquired intangible assets

—

—

—

—

Depreciation and amortization

(1,009

)

(650

)

(4,286

)

(1,945

)

Loss on disposal of property and equipment

—

(4

)

—

(27

)

Non-GAAP operating expenses

$

27,004

$

26,320

$

80,541

$

84,533

R&D operating expenses

$

6,356

$

6,939

$

18,018

$

21,791

Stock-based compensation expense

(497

)

(403

)

(1,317

)

(1,047

)

Depreciation and amortization

(228

)

(148

)

(997

)

(437

)

Gain on disposal of property and equipment

—

—

28

—

Non-GAAP R&D operating expenses

$

5,631

$

6,388

$

15,732

$

20,307

SG&A operating expenses

$

26,595

$

24,466

$

84,524

$

75,740

Stock-based compensation expense

(4,441

)

(4,028

)

(16,398

)

(9,979

)

Amortization of acquired intangible assets

—

—

—

—

Depreciation and amortization

(781

)

(502

)

(3,289

)

(1,508

)

Loss on disposal of property and equipment

—

(4

)

(28

)

(27

)

Non-GAAP SG&A operating expenses

$

21,373

$

19,932

$

64,809

$

64,226

STANDARD BIOTOOLS INC.
RECONCILIATION OF GAAP TO NON-GAAP FINANCIAL INFORMATION
Continuing Operations
(In thousands)
(Unaudited)

ITEMIZED RECONCILIATION OF GAAP NET LOSS TO ADJUSTED EBITDA

Three Months Ended
September 30,

Nine Months Ended
September 30,

2025

2024

2025

2024

Net loss

$

(31,684

)

$

(21,919

)

$

(72,727

)

$

(63,766

)

Income tax (benefit) expense

(1,216

)

118

(1,944

)

270

Interest income

(2,140

)

(4,794

)

(7,517

)

(16,303

)

Interest expense

10

853

21

2,744

Amortization of acquired intangible assets

—

—

—

1,407

Depreciation and amortization

1,599

967

5,693

2,961

Bargain purchase gain

—

—

—

(25,213

)

Restructuring and related charges

7,216

2,341

10,495

12,374

Transaction and integration expenses

43

5,079

1,517

25,024

Stock-based compensation expense

7,536

4,649

20,957

11,627

Cost of sales adjustment

—

—

—

—

Loss on disposal of property and equipment

—

4

187

27

Other non-operating (income) expense

2,092

(957

)

(3,438

)

865

Adjusted EBITDA

$

(16,544

)

$

(13,658

)

$

(46,756

)

$

(47,982

)

STANDARD BIOTOOLS INC.
Condensed Results of Operations
Discontinued Operations
(In thousands)
(Unaudited)

Three Months Ended
September 30,

Nine Months Ended
September 30,

2025

2024

2025

2024

Revenue

$

26,693

$

22,884

$

67,466

$

61,484

Cost of revenue

14,352

11,749

37,784

32,653

Selling, general and administrative expenses

8,474

9,937

25,573

43,280

Research and development

4,849

6,217

16,587

26,567

Transaction and integration expenses

2,203

-

12,710

-

Other (income) expense, net

(182

)

-

(3,736

)

31

Total expenses

$

29,696

$

27,903

$

88,918

$

102,531

Loss from discontinued operations

$

(3,003

)

$

(5,019

)

$

(21,452

)

$

(41,047

)

STANDARD BIOTOOLS INC.
RECONCILIATION OF GAAP TO NON-GAAP FINANCIAL INFORMATION
Discontinued Operations
(In thousands)
(Unaudited)

ITEMIZED RECONCILIATION OF GROSS PROFIT TO NON-GAAP GROSS PROFIT AND MARGIN PERCENTAGE

Three Months Ended
September 30,

Nine Months Ended
September 30,

2025

2024

2025

2024

Gross profit

$

12,340

$

11,134

$

29,682

$

28,831

Amortization of acquired intangible assets

—

540

1,370

1,644

Depreciation and amortization

(76

)

1,126

1,276

2,418

Stock-based compensation expense

214

146

628

296

Loss on disposal of property and equipment

7

—

65

—

Cost of sales adjustment

—

—

—

(1,812

)

Non-GAAP gross profit

$

12,485

$

12,946

$

33,021

$

31,377

Gross margin percentage

46.2

%

48.7

%

44.0

%

46.9

%

Amortization of acquired intangible assets

—

2.4

%

2.0

%

2.6

%

Depreciation and amortization

(0.2

)%

4.9

%

1.9

%

3.9

%

Stock-based compensation expense

0.8

%

0.6

%

0.9

%

0.5

%

Loss on disposal of property and equipment

—

—

0.1

%

—

Cost of sales adjustment

—

—

—

(2.9

)%

Non-GAAP gross margin percentage

46.8

%

56.6

%

48.9

%

51.0

%

STANDARD BIOTOOLS INC.
RECONCILIATION OF GAAP TO NON-GAAP FINANCIAL INFORMATION
Discontinued Operations
(In thousands)
(Unaudited)

ITEMIZED RECONCILIATION OF GAAP TO NON-GAAP OPERATING EXPENSES

Three Months Ended
September 30,

Nine Months Ended
September 30,

2025

2024

2025

2024

Operating expenses

$

15,526

$

16,154

$

54,974

$

69,847

Restructuring and related charges

—

—

(104

)

—

Transaction and integration expenses

(2,203

)

—

(12,710

)

—

Stock-based compensation expense

(724

)

(1,126

)

(2,285

)

(12,339

)

Amortization of acquired intangible assets

—

(171

)

(345

)

(482

)

Depreciation and amortization

—

(1,053

)

(1,004

)

(3,995

)

Loss on disposal of property and equipment

(9

)

(26

)

(199

)

(388

)

Non-GAAP operating expenses

$

12,590

$

13,778

$

38,327

$

52,643

R&D operating expenses

$

4,849

$

6,217

$

16,587

$

26,567

Stock-based compensation expense

(258

)

(321

)

(1,139

)

(3,433

)

Depreciation and amortization

—

(799

)

(843

)

(2,169

)

Loss on disposal of property and equipment

(9

)

—

(175

)

—

Non-GAAP R&D operating expenses

$

4,582

$

5,097

$

14,430

$

20,965

SG&A operating expenses

$

8,474

$

9,937

$

25,573

$

43,280

Stock-based compensation expense

(466

)

(805

)

(1,146

)

(8,906

)

Amortization of acquired intangible assets

—

(171

)

(345

)

(482

)

Depreciation and amortization

—

(254

)

(161

)

(1,826

)

Loss on disposal of property and equipment

—

(26

)

(24

)

(388

)

Non-GAAP SG&A operating expenses

$

8,008

$

8,681

$

23,897

$

31,678

STANDARD BIOTOOLS INC.
RECONCILIATION OF GAAP TO NON-GAAP FINANCIAL INFORMATION
Discontinued Operations
(In thousands)
(Unaudited)

ITEMIZED RECONCILIATION OF GAAP NET LOSS TO ADJUSTED EBITDA

Three Months Ended
September 30,

Nine Months Ended
September 30,

2025

2024

2025

2024

Net loss

$

(3,003

)

$

(5,019

)

$

(21,452

)

$

(41,047

)

Income tax (benefit) expense

(1

)

—

(158

)

31

Interest income

—

—

—

—

Interest expense

—

—

—

—

Amortization of acquired intangible assets

—

711

1,715

2,126

Depreciation and amortization

(76

)

2,180

2,280

6,414

Bargain purchase gain

—

—

—

—

Restructuring and related charges

—

—

104

—

Transaction and integration expenses

2,203

—

12,710

—

Stock-based compensation expense

938

1,272

2,913

12,635

Cost of sales adjustment

—

—

—

(1,812

)

Loss on disposal of property and equipment

17

25

265

388

Other non-operating (income) expense

(183

)

—

(3,683

)

—

Adjusted EBITDA

$

(105

)

$

(832

)

$

(5,306

)

$

(21,266

)

STANDARD BIOTOOLS INC.
Condensed Combined Results of Operations
Continuing Operations and Discontinued Operations
(In thousands)
(Unaudited)

Three Months Ended
September 30,

Nine Months Ended
September 30,

2025

2024

2025

2024

Revenue

$

46,245

$

44,970

$

129,002

$

127,715

Cost of revenue

24,420

21,709

68,159

65,358

Selling, general and administrative expenses

35,069

34,403

110,097

119,020

Research and development

11,205

13,156

34,605

48,358

Transaction and integration expenses

2,246

5,079

14,227

25,024

Restructuring

9,428

2,341

12,707

12,374

Other (income) expense, net

(1,436

)

(4,780

)

(16,614

)

(37,606

)

Total expenses

$

80,932

$

71,908

$

223,181

$

232,528

Net loss

$

(34,687

)

$

(26,938

)

$

(94,179

)

$

(104,813

)

STANDARD BIOTOOLS INC.
RECONCILIATION OF GAAP TO NON-GAAP FINANCIAL INFORMATION
Continuing Operations and Discontinued Operations
(In thousands)
(Unaudited)

ITEMIZED RECONCILIATION OF GROSS PROFIT TO NON-GAAP GROSS PROFIT AND MARGIN PERCENTAGE

Three Months Ended
September 30,

Nine Months Ended
September 30,

2025

2024

2025

2024

Gross profit

$

21,824

$

23,260

$

60,843

$

62,357

Amortization of acquired intangible assets

—

540

1,370

3,051

Depreciation and amortization

514

1,444

2,681

3,435

Stock-based compensation expense

600

364

1,658

897

Loss on disposal of property and equipment

7

—

252

—

Cost of sales adjustment

—

—

—

(1,812

)

Non-GAAP gross profit

$

22,945

$

25,608

$

66,804

$

67,928

Gross margin percentage

47.2

%

51.7

%

47.2

%

48.8

%

Amortization of acquired intangible assets

—

1.2

%

1.1

%

2.4

%

Depreciation and amortization

1.1

%

3.2

%

2.1

%

2.7

%

Stock-based compensation expense

1.3

%

0.8

%

1.3

%

0.7

%

Loss on disposal of property and equipment

—

—

0.1

%

—

Cost of sales adjustment

—

—

—

(1.4

)%

Non-GAAP gross margin percentage

49.6

%

56.9

%

51.8

%

53.2

%

STANDARD BIOTOOLS INC.
RECONCILIATION OF GAAP TO NON-GAAP FINANCIAL INFORMATION
Continuing Operations and Discontinued Operations
(In thousands)
(Unaudited)

ITEMIZED RECONCILIATION OF GAAP TO NON-GAAP OPERATING EXPENSES

Three Months Ended
September 30,

Nine Months Ended
September 30,

2025

2024

2025

2024

Operating expenses

$

57,948

$

54,979

$

171,740

$

204,776

Restructuring and related charges

(9,428

)

(2,341

)

(12,811

)

(12,374

)

Transaction and integration expenses

(2,246

)

(5,079

)

(14,227

)

(25,024

)

Stock-based compensation expense

(5,662

)

(5,557

)

(20,000

)

(23,365

)

Amortization of acquired intangible assets

—

(171

)

(345

)

(482

)

Depreciation and amortization

(1,009

)

(1,703

)

(5,290

)

(5,940

)

Loss on disposal of property and equipment

(9

)

(30

)

(199

)

(415

)

Non-GAAP operating expenses

$

39,594

$

40,098

$

118,868

$

137,176

R&D operating expenses

$

11,205

$

13,156

$

34,605

$

48,358

Stock-based compensation expense

(755

)

(724

)

(2,456

)

(4,480

)

Depreciation and amortization

(228

)

(947

)

(1,840

)

(2,606

)

Loss on disposal of property and equipment

(9

)

—

(147

)

—

Non-GAAP R&D operating expenses

$

10,213

$

11,485

$

30,162

$

41,272

SG&A operating expenses

$

35,069

$

34,403

$

110,097

$

119,020

Stock-based compensation expense

(4,907

)

(4,833

)

(17,544

)

(18,885

)

Amortization of acquired intangible assets

—

(171

)

(345

)

(482

)

Depreciation and amortization

(781

)

(756

)

(3,450

)

(3,334

)

Loss on disposal of property and equipment

—

(30

)

(52

)

(415

)

Non-GAAP SG&A operating expenses

$

29,381

$

28,613

$

88,706

$

95,904

STANDARD BIOTOOLS INC.
RECONCILIATION OF GAAP TO NON-GAAP FINANCIAL INFORMATION
Continuing Operations and Discontinued Operations
(In thousands)
(Unaudited)

ITEMIZED RECONCILIATION OF GAAP NET LOSS TO ADJUSTED EBITDA

Three Months Ended
September 30,

Nine Months Ended
September 30,

2025

2024

2025

2024

Net loss

$

(34,687

)

$

(26,938

)

$

(94,179

)

$

(104,813

)

Income tax (benefit) expense

(1,217

)

118

(2,102

)

301

Interest income

(2,140

)

(4,794

)

(7,517

)

(16,303

)

Interest expense

10

853

21

2,744

Amortization of acquired intangible assets

—

711

1,715

3,533

Depreciation and amortization

1,523

3,147

7,971

9,375

Bargain purchase gain

—

—

—

(25,213

)

Restructuring and related charges

7,216

2,341

10,599

12,374

Transaction and integration expenses

2,246

5,079

14,227

25,024

Stock-based compensation expense

8,474

5,921

23,870

24,262

Cost of sales adjustment

—

—

—

(1,812

)

Loss on disposal of property and equipment

17

29

452

415

Other non-operating (income) expense

1,909

(957

)

(7,121

)

865

Adjusted EBITDA

$

(16,649

)

$

(14,490

)

$

(52,064

)

$

(69,248

)