Relay Therapeutics, Inc. · NASDAQ:RLAY

Relay Therapeutics — J.P. Morgan Healthcare Conference 2023

51 slides from Relay Therapeutics's conference presentation, Jan 9, 2023

  1. Slide 1: JPM Presentation January 2023

    JPM Presentation January 2023

  2. Slide 2: Disclaimer

    Disclaimer This presentation contains forward-looking statements and information about our current and future prospects and our operations and financial results, which are based on currently available information. All statements other than statements of historical facts contained in this presentatio

  3. Slide 3: Relay Tx — Patient-Driven

    Relay Tx — Patient-Driven revay Validated Approach Clinical EXPERIMENTATION +) COMPUTATION Pre-clinical piakarn) selective) ERa Q RLY-5836 cDK2 Degrader New Breed of Biotech Clear Focus Execution-Focused Targets & L =| Validated Genetic Therapeutic Ta colt ‘Oncology Areas . diseases - oo r= = Small

  4. Slide 4: Relay Tx – Dynamo Platform

    Relay Tx – Dynamo™ Platform Dynamo™ Platform… …is focused on making medicines …aims to address selectivity on validated targets Modulation Hypothesis Hit Identification Lead Optimization Target Identification Develop-ment Commercial-ization Focus of platform PEOPLE Chemical biology insights Deep str

  5. Slide 5: Relay Tx – Execution Focused

    Relay Tx – Execution Focused Public, clinical org Cash runway into 2025 5 disclosed programs 5+ unnamed programs Platform: + ML-DEL and Automation Presented clinical data at ESMO & Triple Meeting 3 assets in clinic Company Programs Jan 2020 Jan 2023 Private Preclinical Purely research 2 disclosed ta

  6. Slide 6: Relay Tx – Extensive Precision Medicine Pipeline

    Target Program Annual US Patient # Breast Cancer1 PI3Kα franchise PI3KαPAN RLY-26082 ~8-51K ~50-156K all solid tumors RLY-58362 PI3KαSPECIFIC H1047R-specific ~4-25K ~15-48K all solid tumors Challengers CDK2 Selective CDK2 ~46K3 (Patients receiving CDK4/6i) Challengers Degrader ERα Degrader ~29-196K4

  7. Slide 7: Relay Tx – Capital, Team & Execution Focus to Deliver

    Relay Tx – Capital, Team & Execution Focus to Deliver $1.1B Cash, cash equivalents and investments as of the end of 3Q 2022 Current cash, cash equivalents and investments are expected to be sufficient to fund current operating plan into 2025 Tumor Agnostic Breast Cancer Franchise GDC-1971 (SHP2) RLY

  8. Slide 8: Relay Tx Programs

    Relay Tx Programs

  9. Slide 9: Relay Tx – Extensive Precision Medicine Pipeline

    Target Program Breast Cancer PI3Kα franchise PI3KαPAN RLY-2608 RLY-5836 PI3KαSPECIFIC H1047R-specific Challengers CDK2 Selective CDK2 Challengers Degrader ERα Degrader Undisclosed 1 program FGFR2 RLY-4008 Mutant + WT Tumor Agnostic SHP2 GDC-1971 Undisclosed 2 programs GD Genetic diseases 2 programs

  10. Slide 10: FGFR2 – Validated Target Present in Several Tumor Types

    FGFR2 – Validated Target Present in Several Tumor Types Fusions3 Amplifications Mutations FGFR2 Annual Cases (US, comprehensive) FGFR2-altered cancers remain a high unmet medical need Pancreatic Breast Endometrial Skin Melanoma Stomach Lung Bladder CUP Ovarian ~5K-15K ~4.5K-7.5K FGFR2 alterations ar

  11. Slide 11: FGFR2 – Limitations of Current FGFR Inhibitor Landscape

    FGFR2 – Limitations of Current FGFR Inhibitor Landscape Sources: Pemigatinib – prescribing information; futibatinib – prescribing Information; erdafitinib – prescribing information 1. From pemigatinib NDA review documents: "Pemigatinib 13.5 mg daily provided 76% inhibition of ex vivo phosphorylated

  12. Slide 12: FGFR2 – Standard Approach to Discovery Has Had Limited Success

    FGFR2 – Standard Approach to Discovery Has Had Limited Success Standard Approach FGFR1 FGFR2

  13. Slide 13: FGFR2 – Increasing Resolution Reveals New Opportunities

    FGFR2 – Increasing Resolution Reveals New Opportunities FGFR1 FGFR2 Down Up Down Up Down Up Down Up Down Up Up Up Down Down Down Up Exploiting the dynamic difference between FGFR1 and FGFR2 enabled Relay Tx to design a selective FGFR2 inhibitor We predicted that a segment of FGFR1 would be fully ext

  14. Slide 14: RLY-4008 – Is A Highly Selective and Irreversible Inhibitor

    RLY-4008 – Is A Highly Selective and Irreversible Inhibitor Pan-FGFR Inhibitors RLY-4008 AZD4547 Erdafitinib Pemigatinib Futibatinib FGFR2 Note: Single experiment that tested each compound run at 500nM against 468 targets in the absence of ATP and without preincubation Source: KINOMEscanTM by Eurofi

  15. Slide 15: RLY-4008 – ReFocus Trial Design

    RLY-4008 – ReFocus Trial Design Part 1: Dose Escalation Unresectable or metastatic solid tumors FGFR2 alterations per local assessment Both FGFRi-naïve & FGFRi-treated allowed RLY-4008 RP2D: 70 mg QD Data cut-off: August 01, 2022; efficacy analysis includes patients with measurable disease who had o

  16. Slide 16: RLY-4008 – Patient Characteristics

    RLY-4008 – Patient Characteristics Fusion+ CCA FGFRi-Naïve1 Total (N=195)2 Parameter 70 mg QD (N=17) All doses (N=38) Age (years), median (range) 57 (36-81) 58 (33-81) 59 (23-87) Female, % 59% 58% 62% Race, % White / Asian / Black / Unknown 41% / 24% / 0% / 35% 58% / 21% / 3% / 18% 63% / 15% / 4% /

  17. Slide 17: RLY-4008 – Interim Response Data

    Approved Pan-FGFR Inhibitors Demonstrate 23-36% ORR in This Population3 RLY-4008 – Interim Response Data FGFRi-Naïve Fusion+ CCA Patients at Pivotal Dose (70 mg QD) Best RECIST Change (%) from Baseline Based on Investigator Evaluated Response for Fusion+ CCA FGFRi-Naïve Patients at 70 mg QD (N=17) 1

  18. Slide 18: RLY-4008 – Interim Response Data Across All Doses

    RLY-4008 – Interim Response Data FGFRi-Naïve Fusion+ CCA Patients Across All Doses 92% of Patients With Tumor Reduction Across All Dose Levels, Majority of Patients With Partial Response per RECIST 1.1 Best RECIST Change (%) from Baseline Based on Investigator Evaluated Response for Fusion+ CCA FGFR

  19. Slide 19: RLY-4008 – Time on Treatment for Fusion+ CCA FGFRi-Naïve Patients

    RLY-4008 – Time on Treatment for Fusion+ CCA FGFRi-Naïve Patients (All Doses) Complete tumor resection: R0 resection performed in curative intent, patient remains no evidence of disease as of 31 May 2022 Data cut-off: August 01, 2022; efficacy analysis includes patients with measurable disease who h

  20. Slide 20: RLY-4008 – Treatment-Related Adverse Events Interim Profile

    RLY-4008 – Treatment-Related Adverse Events (TRAEs) Interim Profile TRAEs > 15% TRAE Dose Modification RP2D, 70 mg QD (N=89) All Doses (N=195) Dose interruption (%) 42% 47% Dose reduction (%) 27% 33% Dose discontinuation (%) 1% 1%* Clinically Insignificant Off-Target Hyperphosphatemia (12%, all Gr 1

  21. Slide 21: RLY-4008 Poised for Tumor Agnostic Validation Across FGFR2 Alterations

    RLY-4008 Poised for Tumor Agnostic Validation Across FGFR2 Alterations Non-CCA advanced, solid tumors with FGFR2 alterations Non-CCA patients with FGFR2-fusion Non-CCA patients with FGFR2-amplification Non-CCA patients with FGFR2-mutation Tumor regression observed across FGFR2 mutations and amplific

  22. Slide 22: Relay Tx Solution – Addressing Unmet Need Through Greater Selectivity

    Relay Tx Solution – Addressing Unmet Need Through Greater Selectivity Sources: KINOMEscanTM by Eurofins DiscoverX; RLY-4008 data as presented at ESMO Congress 2022 1. Interim data as of 01 August 2022; 2. Single experiment that tested each compound run at 500nM against 468 targets in the absence of

  23. Slide 23: RLY-4008 – ReFocus Trial

    Part 1: Dose Escalation Demonstrate clinical proof of mechanism RLY-4008 – ReFocus Trial RP2D Target Inhibition Tolerability Selectivity Part 2: Dose Expansion and Pivotal Cohort Confirm dose and establish efficacy Other FGFR2-altered CCA Pivotal: Fusion+ CCA, FGFRi-naïve FGFR2-altered, non-CCA tumo

  24. Slide 24: Relay Tx – Emerging Breast Cancer Franchise

    Target Program Breast Cancer PI3Kα franchise PI3KαPAN RLY-2608 RLY-5836 PI3KαSPECIFIC H1047R-specific Challengers CDK2 Selective CDK2 Challengers Degrader ERα Degrader Undisclosed 1 program FGFR2 RLY-4008 – Mutant + WT Tumor Agnostic SHP2 GDC-1971 Undisclosed 2 programs GD Genetic diseases 2 program

  25. Slide 25: Breast Cancer – Limitations of Current Standard of Care

    Breast Cancer – Limitations of Current Standard of Care …is limited by efficacy of available treatments HR+/HER2- breast cancer standard of care1… Adjuvant 1L 2L+ Chemo Chemo Chemo / Enhertu® Targeted Tx Targeted Tx Targeted Tx Endocrine Tx (AI, SERD2) CDK4/6 +/- Endocrine Tx (AI, SERD2) CDK4/6 +/-

  26. Slide 26: Relay Tx Solution – Highly Selective Breast Cancer Franchise

    Relay Tx Solution – Highly Selective Breast Cancer Franchise Aspirational future state standard of care (HR+/HER2- BC)1 Targeted Tx Chemo / Enhertu® Chemo Chemo Adjuvant 1L 2L+ Targeted Tx Targeted Tx Next Gen Endocrine Tx Selective CDKs Others Mutant PI3Kα Next Gen Endocrine Tx Selective CDKs Mutan

  27. Slide 27: Relay Tx – Extensive Precision Medicine Pipeline

    Target Program Breast Cancer PI3Kα franchise PI3KαPAN RLY-2608 RLY-5836 PI3KαSPECIFIC H1047R-specific Challengers CDK2 Selective CDK2 Challengers Degrader ERα Degrader Undisclosed 1 program FGFR2 RLY-4008 Mutant + WT Tumor Agnostic SHP2 GDC-1971 Undisclosed 2 programs GD Genetic diseases 2 programs

  28. Slide 28: PI3Kα – Large Precision Oncology Opportunity

    PI3Kα – Large Precision Oncology Opportunity (excl. H1047R) HR+/HER2- breast cancer is the largest single indication with PI3Kα mutated patients Pan-mutant selective drug is a significant clinical opportunity for solid tumors… …with HR+/HER2- breast cancer as the single largest indication with PI3Kα

  29. Slide 29: PI3Kα – Existing Inhibitors Have Limited Therapeutic Window

    based PI3Kα – Existing Inhibitors Have Limited Therapeutic Window Limited Target Inhibition Limited Tolerability Compound All Gr3+ Tox Hyperglycemia GI Tox (all Gr) Rash (all Gr) All Gr Gr3+ Alpelisib1-7 44-78% 33-65% 13-37% 33-60% 20-36% Inavolisib8-12 33-54% 55-70% 5-22% 27-50% 7-27% Note: fulv =

  30. Slide 30: PI3Kα – Proprietary Insights Unlock Novel Approaches

    PI3Kα – Proprietary Insights Unlock Novel Approaches A differentiated understanding of the structure of PI3Kα and its relationship to function equips Relay Tx to design optimal mutant-selective inhibitors of PI3Kα Designed pan-mutant selective PI3Kα inhibitor (PI3KαPAN) Discovered novel allosteric p

  31. Slide 31: RLY-2608 – Mutant and Isoform Selectivity

    RLY-2608 – Mutant and Isoform Selectivity Potency (nM) H1047R E542K E545K WT Alpelisib Inavolisib RLY-2608 RLY-2608 has shown biochemical selectivity for mutant over wild type PI3Kα α-mut Potency (nM) β δ Alpelisib RLY-2608 Inavolisib RLY-2608 was inactive on other isoforms γ α-mut β δ γ α-mut β δ γ

  32. Slide 32: RLY-2608 – Selective Across the Kinome

    RLY-2608 – Selective Across the Kinome RLY-2608 inhibited only PI3Kα, with preferential inhibition of mutant Source: RLY-2608 data as presented in 2021 AACR-NCI-EORTC Molecular Targets Conference poster presentation Selectivity

  33. Slide 33: RLY-2608 – Reduced Impact on Glucose Homeostasis

    In higher species, dosing of RLY-2608 for 28 days showed no histopathological or ophthalmic findings associated with hyperglycemia RLY-2608 – Reduced Impact on Glucose Homeostasis Tolerability Hyperglycemia Definitions (CTCAE v5.0) Grade CTCAE Definition (v5.0) Gr 1 Abnormal glucose above baseline,

  34. Slide 34: RLY-2608 – In Vivo Tumor Regressions

    RLY-2608 – In Vivo Tumor Regressions Target Inhibition and Efficacy

  35. Slide 35: RLY-2608 – First Mutant Selective Inhibitor to Enter the Clinic

    Limited potency against WT PI3Kα and other PI3K isoforms RLY-2608 – First Mutant Selective Inhibitor to Enter the Clinic Potency (nM) Alpelisib Inavolisib RLY-2608 WT Mutant WT Mutant WT Mutant Favorable Selectivity Favorable Efficacy Favorable Target Inhibition Manageable key toxicities, especially

  36. Slide 36: RLY-2608 – Trial Design

    RLY-2608 – Trial Design Part 1: Dose Escalation 1. Excludes PIK3CAmut clear cell OvCA, HNSCC, and Cervical cancer patients; 2. Double mutation defined as one major PIK3CA mutation (E542X, E545X, H1047X) + ≥1 additional PI3KCA mutation per local assessment; 3. Intolerance to PI3Kα inhibitors is defin

  37. Slide 37: RLY-2608 – Data Disclosure

    RLY-2608 – Data Disclosure Part 1: Dose Escalation Demonstrate clinical proof of mechanism Part 2: Dose Expansion Establish early efficacy & confirm dose Part 3: Pivotal Trial Establish definitive efficacy RP2D Target Inhibition Tolerability Selectivity Early Signals of Efficacy Interpretable Effica

  38. Slide 38: Relay Tx – Extensive Precision Medicine Pipeline

    Target Program Breast Cancer PI3Kα franchise PI3KαPAN RLY-2608 RLY-5836 PI3KαSPECIFIC H1047R-specific Challengers CDK2 Selective CDK2 Challengers Degrader ERα Degrader Undisclosed 1 program FGFR2 RLY-4008 Mutant + WT Tumor Agnostic SHP2 GDC-1971 Undisclosed 2 programs GD Genetic diseases 2 programs

  39. Slide 39: RLY-5836 – Similar Pre-clinical Profile, Different Chemical Properties

    Clinical start anticipated in 2Q 2023 RLY-5836 – Similar Pre-clinical Profile, Different Chemical Properties from RLY-2608 Source: Internal RLY-5836 data 1. This model also carries a second mutation at K567R E545K mutant (MDAMB361) (mouse)1 H1047R mutant (HCC1954) (mouse) RLY-5836 achieved active do

  40. Slide 40: Relay Tx – Extensive Precision Medicine Pipeline

    Target Program Breast Cancer PI3Kα franchise PI3KαPAN RLY-2608 RLY-5836 PI3KαSPECIFIC H1047R-specific Challengers CDK2 Selective CDK2 Challengers Degrader ERα Degrader Undisclosed 1 program FGFR2 RLY-4008 Mutant + WT Tumor Agnostic SHP2 GDC-1971 Undisclosed 2 programs GD Genetic diseases 2 programs

  41. Slide 41: CDK2 – Highly Selective Inhibitors Identified

    CDK2 – Highly Selective Inhibitors Identified Clinical start expected in early 2024 First compound synthesized to identification of lead compounds in <1 year RTX-1 RTX-2 Biochemical Potency CDK2/CycE IC50 (mM) 0.002 0.004 Biochemical Selectivity (fold over) CDK1/CycB 260x 100x CDK4/CycD1 685x 273x C

  42. Slide 42: ERα Degrader – Rapidly Obtained Potent Compounds

    ERα Degrader – Rapidly Obtained Potent Compounds Development Candidate nomination expected in 2023 …to obtain potent ERα degraders Cellular proliferation Pathway suppression Relay Tx is leveraging rational design… Multiple experimental tools deployed to develop conformational models that enable effe

  43. Slide 43: Relay Tx Solution – Highly Selective Breast Cancer Franchise

    Relay Tx Solution – Highly Selective Breast Cancer Franchise Efficacy Target Inhibition Tolerability Selectivity Relay Tx Solution Target Program Breast Cancer PI3Kα franchise PI3KαPAN RLY-2608 RLY-5836 PI3KαSPECIFIC H1047R-specific Challengers CDK2 Selective CDK2 Challengers Degrader ERα Degrader U

  44. Slide 44: Relay Tx – Extensive Precision Medicine Pipeline

    Target Program Breast Cancer PI3Kα franchise PI3KαPAN RLY-2608 RLY-5836 PI3KαSPECIFIC H1047R-specific Challengers CDK2 Selective CDK2 Challengers Degrader ERα Degrader Undisclosed 1 program FGFR2 RLY-4008 Mutant + WT Tumor Agnostic SHP2 GDC-1971 Undisclosed 2 programs GD Genetic diseases 2 programs

  45. Slide 45: SHP2 – Genentech Global Collaboration for GDC-1971

    SHP2 – Genentech Global Collaboration for GDC-1971 (Formerly RLY-1971) Collaboration provides meaningful economics to Relay Tx1 Source: World Lung 2022 #OA03.04 1. As of December 31, 2022: $105 million in upfront & milestone payments received, plus an opt-in option for 50/50 profit share and up to $

  46. Slide 46: Relay Tx – Extensive Precision Medicine Pipeline

    Target Program Breast Cancer PI3Kα franchise PI3KαPAN RLY-2608 RLY-5836 PI3KαSPECIFIC H1047R-specific Challengers CDK2 Selective CDK2 Challengers Degrader ERα Degrader Undisclosed 1 program FGFR2 RLY-4008 Mutant + WT Tumor Agnostic SHP2 GDC-1971 Undisclosed 2 programs GD Genetic diseases 2 programs

  47. Slide 47: Relay Tx – The Dynamo Platform

    Relay Tx – The Dynamo™ Platform 5+ Undisclosed Programs Inhibitors Degraders New Modalities Chaperones Platform capabilities and expertise continue to expand Enabling deep and diversified early pipeline

  48. Slide 48: Relay Tx – Extensive Precision Medicine Pipeline

    Target Program Annual US Patient # Breast Cancer1 PI3Kα franchise PI3KαPAN RLY-26082 ~8-51K ~50-156K all solid tumors RLY-58362 PI3KαSPECIFIC H1047R-specific ~4-25K ~15-48K all solid tumors Challengers CDK2 Selective CDK2 ~46K3 (Patients receiving CDK4/6i) Challengers Degrader ERα Degrader ~29-196K4

  49. Slide 49: Relay Tx – Capital, Team & Execution Focus to Deliver

    Relay Tx – Capital, Team & Execution Focus to Deliver $1.1B Cash, cash equivalents and investments as of the end of 3Q 2022 Current cash, cash equivalents and investments are expected to be sufficient to fund current operating plan into 2025 Tumor Agnostic Breast Cancer Franchise GDC-1971 (SHP2) RLY

  50. Slide 50: Relay Tx 2021 ESG Report – Continuing Our ESG Journey

    Relay Tx 2021 ESG Report – Continuing Our ESG Journey Relay Tx’s First Full ESG Annual Report Patients Community Environment Governance Our patients / future patients Our community in Cambridge and the broader Boston area The next generation of scientists *As of December 2021 People 98% employee res

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