Prelude Therapeutics Incorporated · NASDAQ:PRLD

Prelude Therapeutics — Investor Presentation (January 2022)

30 slides from Prelude Therapeutics's investor presentation, Jan 10, 2022

  1. Slide 1: Precision Oncology Redefined

    Precision Oncology Redefined Corporate Presentation January 2022 Exhibit 99.1

  2. Slide 2: Forward Looking Statements

    Forward Looking Statements This presentation contains “forward-looking” statements within the meaning of the “safe harbor” provisions of the Private Securities Litigation Reform Act of 1995, including, but not limited to: our plans to develop and commercialize small molecule therapies, our expectati

  3. Slide 3: Prelude Therapeutics: Vision

    Prelude Therapeutics: Vision Build a fully integrated oncology company on the foundation of drug discovery excellence to deliver novel precision oncology medicines to patients with underserved cancers

  4. Slide 4: Prelude Therapeutics: Building for Success

    Powered by experienced drug developers with a proven track record of multiple successful oncology medicines Internal Discovery Engine Prelude Therapeutics: Building for Success Effective integration between cancer biology and medicinal chemistry to rapidly iterate and discover optimized molecules in

  5. Slide 5: Building a Deep Portfolio of Oncology Assets

    Target MOA Molecule(s) Development Stage Target Cancers Building a Deep Portfolio of Oncology Assets MCL1 CDK9 SMARCA2 (BRM) mRNA Splicing & DNA Repair PRT543 & PRT811 Phase 1 Expansion Spliceosome Mutations Selected CNS HRD+ Apoptosis PRT1419 Phase 1 Escalation Venetoclax and TKI- Resistant Heme an

  6. Slide 6: Diversified Precision Oncology Pipeline

    Program Cancer Indications IND Enabling Phase 1 Escalation Phase 1 Expansion Phase 2/3 Upcoming Milestones PRT543 (PRMT5) ACC, HRD+, spliceosome mutations Data readouts 2H22 Selected myeloid malignancies (incl. MF and MDS) PRT811 (Brain Penetrant PRMT5) IDH+ high grade glioma, uveal melanoma Data re

  7. Slide 7: 2021 Accomplishments and 2022 Goals

    Complete expansion phases for both molecules Demonstrate PoC in one or more indications Advance PRMT5 program into Phase 2 Establish RP2D Demonstrate safety in combination with Venetoclax/Azacitidine Demonstrate PoC Complete dose escalation Establish safety, target engagement and RP2D File INDs Init

  8. Slide 8: PRMT5 Program PRT543 & PRT811

    PRMT5 Program PRT543 & PRT811

  9. Slide 9: PRMT5 Pathway Drives Oncogenesis and Resistance

    PRMT5 Pathway Drives Oncogenesis and Resistance Transcription Factors PRMT5 Spliceosome Proteins Histones Symmetric Dimethylation PRMT5 catalyzes symmetric arginine dimethylation (sDMA) of protein substrates including histones, transcription factors, and spliceosome proteins Dimethylated substrates

  10. Slide 10: Potential Best-In-Class PRMT5 Inhibitors

    PRT543 PRT811 Potential Best-In-Class PRMT5 Inhibitors Differentiated PRMT5 Inhibitors Highly selective and potent oral candidates PRT811 is highly differentiated in the class with high brain penetration potential Applicability in Both Solid Tumors and Heme Strong scientific rationale and robust pre

  11. Slide 11: PRMT5: Phase Overview

    PRMT5: Phase 1 Overview Dose Escalation Unselected Patients Expansion Cohorts Selected Patients Solid Tumors GBM Myeloid Malignancies Recommended Expansion Doses PRT543 PRT811 Completed Ongoing PRT543 45 mg 5x/wk (solids) 35 mg 5x/wk (heme) PRT811 600 mg QD 1 2 3 4 5 6 7 Adenoid Cystic Carcinoma (N~

  12. Slide 12: PRT543 and PRT811 Demonstrate Desirable PK and PD Properties

    PRT543 and PRT811 Demonstrate Desirable PK and PD Properties Dose-dependent Inhibition of Serum sDMA Dose-Dependent Increases in Cmax and AUC Data presented at 2021 AACR-NCI-EORTC Annual Meeting PRT543 PRT811

  13. Slide 13: PRT543 and PRT811 Clinical Activity and Safety

    Durable CR in a patient with HRD+ ovarian cancer (35 mg 5x/wk; still on Rx) Stable disease and tumor regressions (<30%) in 5 patients including ACC and uveal melanoma Sustained hemoglobin and anemia improvements in multiple patients with myeloid malignancies Unselected patient population with advanc

  14. Slide 14: PRMT5 Phase 1: Key Takeaways and Next Steps

    PRMT5 Phase 1: Key Takeaways and Next Steps Favorable Safety Profile Desirable PK & PD Profiles Preliminary Clinical Activity Next Steps PRT543 and PRT811 well tolerated Low incidence of dose-limiting toxicities at expansion doses Dose-dependent increase in exposure PRT811 demonstrated best-in-class

  15. Slide 15: MCL1 Program

    MCL1 Program Ca) <3 Prelude

  16. Slide 16: MCL1: Targeting Cancer Cell Survival

    MCL1: Targeting Cancer Cell Survival MCL1 is a member of family inhibitors of apoptosis (BCL2); often overexpressed in cancers BCL2 family is clinically validated – Venetoclax approved for lymphoid and myeloid malignacies MCL-1 is a bypass and resistance mechanism for venetoclax and multiple TKIs Ch

  17. Slide 17: PRT1419 Differentiated Clinical-Stage MCL1 Inhibitor Candidate

    PRT1419 Differentiated Clinical-Stage MCL1 Inhibitor Candidate MCL1 Inhibitor Potent and selective No cardiotoxicity signal in GLP-toxicology Studies Targeting Selected Heme and Solid Cancers Robust activity in preclinical models with once weekly dosing Potential combination strategy with Venetoclax

  18. Slide 18: PRT1419 Phase 1 Overview

    Status Dose escalation (monotherapy) ongoing Oral – Myeloid malignancies IV – Solid tumors Next Steps Combination cohorts Venetoclax and/or HMA Identify RP2D and initiate expansion phase Report dose escalation data (2H2022) Dose Escalation (ongoing) AML and High Risk MDS (Oral) Solid Tumors (IV) Rec

  19. Slide 19: CDK9 Program

    CDK9 Program Prelude : PRT2527 THERAPEUTICS

  20. Slide 20: CDK9: Targeting Cancer Through Transcriptional Regulation

    CDK9: Targeting Cancer Through Transcriptional Regulation CDK9 phosphorylates RNA Pol II and regulates transcription Regulates expression of several immediate early genes driving oncogenesis and resistance (i.e. MYC, MYB, MCL1) Non-selective CDK9 inhibitors have demonstrated clinical activity in mul

  21. Slide 21: PRT2527 Potential Best-in-Class Selectivity and Potency CDK9 Inhibitor

    PRT2527 Potential Best-in-Class Selectivity and Potency CDK9 Inhibitor Most selective in the class vs CDK family and across the kinome Low nanomolar potency in blocking tumor cell proliferation Targeting Selected Heme and Solid Cancers Robust activity in preclinical models at well-tolerated doses En

  22. Slide 22: PRT2527 Phase 1 Status and Next Steps

    Status Next Steps Phase 1 Overview Phase 1 Baysian Design (ongoing) MYC-dependent Solid Tumors and Hematologic Malignancies MYC-dependent solid tumors Sarcoma Hematologic malignancies PoC Phase 2 (Target 1H 2023) Complete Phase 1 Select RP2D Initiate Phase 2 Dose Escalation Solid tumors Hematologica

  23. Slide 23: SMARCA2 (BRM) Program

    SMARCA2 (BRM) Program Prelude THERAPEUTICS ay

  24. Slide 24: Targeting SMARCA2 (BRM): Leveraging Synthetic Lethality

    The chromatin remodeling (SWI/SNF) complex is frequently mutated in cancer making it a potential therapeutic target Activity of the SWI/SNF complex requires either SMARCA4 (BRG1) or SMARCA2 (BRM) Loss of SMARCA4 (BRG1) through mutation leads to dependency on SMARCA2 (BRM) Subsets of solid tumors exp

  25. Slide 25: Achieving SMARCA2 Selectivity Through Degrader Approach

    Achieving SMARCA2 Selectivity Through Degrader Approach SMARCA2 selectivity over highly homologous SMARCA4 isoform has been a challenging medicinal chemistry problem with traditional small molecule approaches Targeted Protein Degradation (TPD) of SMARCA2 selectively over SMARCA4 is possible through

  26. Slide 26: PRT-SCA2: Potent and Selective SMARCA2 Degrader with in Vivo Activity

    PRT-SCA2: Potent and Selective SMARCA2 Degrader with in Vivo Activity Prelude SMARCA2 Degraders Replicate Genetic Synthetic Lethality Highly Selective for SMARCA2 Degradation SMARCA2 Actin Veh 8h 24h SMARCA4 Hours after dosing In vitro In vivo HT1080 SM4 KO DMSO 0.1 1.0 10 100 1000 PRT007(nM): Calu-

  27. Slide 27: SMARCA2 Degrader Program Overview

    Status Next Steps Candidate molecule(s) identified IND enabling studies initiated File IND 2022 Initiate Phase 1 escalation study in SMARCA4 mutant cancers SMARCA4 Mutated NSCLC and other tumor types Phase 1 Dose Escalation Target 2H 2022 SMARCA2 Degrader Program Overview IND Filing IND Enabling Stu

  28. Slide 28: Corporate Highlights

    Corporate Highlights <3 Prelude

  29. Slide 29: Our Investment Thesis

    Our Investment Thesis Internal discovery engine Differentiated R&D approach Strong execution and commitment to discovery Focused clinical development in underserved cancers Strong financial position: ~$320M cash and marketable securities at 9/30/21 PMRT5 MCL1 CDK9 SMARCA2 (BRM) Data Rich 2022

  30. Slide 30: Thank You

    Thank You <3 Prelude cata

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