Atyr Pharma, Inc. · NASDAQ:ATYR

Atyr Pharma — Investor Presentation (August 2017)

33 slides from Atyr Pharma's investor presentation, Aug 28, 2017

  1. Slide 1: Targeting Novel Immune Therapeutic Intervention Points

    Targeting Novel Immune Therapeutic Intervention Points First-in-Class Treatments for Patients with Myopathies & Lung Diseases Novel I/O Target for Universal Backbone Therapy for Cancer Patients aTyr Pharma, Inc. August 2017 Exhibit 99.2

  2. Slide 2: Forward-Looking Statements

    Forward-Looking Statements The following slides and any accompanying oral presentation contain forward-looking statements within the meaning of the Private Securities Litigation Reform Act of 1995 and other federal securities laws. The use of words such as “may,” “might,” “will,” “should,” “expect,”

  3. Slide 3: LIFE Candidate Pipeline

    LIFE Candidate Pipeline All programs currently wholly-owned Resokine Agonist Platform Preclinical Phase 1 Phase 2 Phase 3 Rare Muscular Dystrophies Resolaris Program (ATYR 1940)* Interstitial Lung Diseases iMod.Fc Program (ATYR 1923) Resolaris Program (ATYR 1940) Resokine Antagonist Platform Preclin

  4. Slide 4: Tapping the Power of the Resokine Pathway

    Evolved from Cellular Homeostasis Genes over 400 Million Years Tapping the Power of the Resokine Pathway

  5. Slide 5: Resokine Pathway: Evidence For A New Immunological Pathway in Humans

    Resokine Pathway: Evidence For A New Immunological Pathway in Humans: Resokine Disrupting the pathway promotes T-cell invasion Homeostasis Imbalance (↑ Immune cell invasion/activity) Diseased Muscle Diseased Lung Healthy muscle Healthy lung 100% (18 of 18) anti-synthetase syndrome patients tested po

  6. Slide 6: Resokine Levels Influence Tolerance and Immunity

    Resokine Levels Influence Tolerance and Immunity Resokine pathway as a set point modulator of immune engagement Adapted from graphic from Chen et al 2017 Tolerance Suppression Immunity Inflammation Immune Cell Population n

  7. Slide 7: Resokine Hypothesis in Immune Invaded Tissues

    Resokine Hypothesis in Immune Invaded Tissues: Damage Signals Exceed Resokine Ability to Resolve Immune Engagement Adapted from graphic from Chen et al 2017 Tolerance Suppression Immunity Inflammation Immune Cell Population n Muscle Disease Lung Disease

  8. Slide 8: Resokine Hypothesis in Cancer

    Resokine Hypothesis in Cancer: Higher than Normal Resokine Adapted from graphic from Chen et al 2017 Tolerance Suppression Immunity Inflammation Immune Cell Population n Tumor Tissue

  9. Slide 9: MOA Hypothesis: T Cells Release Granzyme B

    Boivin et al., Lab Invest., 2009 Chen et al., Immunity, 2013 MOA Hypothesis: T Cells Release Granzyme B That Promotes Cell Death & Local Tissue Damage Muscle Disease Lung Disease Tumor Tissue Promotes Cell Death T cell (Activated) T cell (Less Activated) T cell (Activated/ No Resokine) Resokine boun

  10. Slide 10: Resokine Inhibits Granzyme B Release From Activated Human T Cells

    Resokine Inhibits Granzyme B Release From Activated Human T Cells Key mediator of T cell cytotoxicity Resokine (pM) Human T Cell Granzyme B Release Post Activation vehicle 30,000 Stimulated Potential For More Tissue Damage **** p < 0.0001 Granzyme B Promotes Cell Death Note: Common with human donors

  11. Slide 11: Resokine Agonists Change T Cell Phenotype

    Effector functions at levels closer to a resting T cell Stimulatory pathways at levels closer to a resting T cell Resokine Agonists Change T Cell Phenotype Unique MOA to orchestrate immune homeostasis in activated T cells Shifts trafficking & residence closer to a resting T cell T cell (Less activat

  12. Slide 12: Harnessing New Immunological Insights Across Therapeutic Areas, 3 Modalities

    Harnessing New Immunological Insights Across 3 Therapeutic Areas, 3 Therapeutic Modalities TPP = Target Product Profile ILD = Interstitial Lung Disease ORCA = Orchestrating Resokine Complete Antagonism Resolaris “Native Agonist” to Resokine pathway May promote tissue homeostasis in muscle & lung No

  13. Slide 13: Resolaris Program

    Harnessing the Resokine Pathway to Treat Multiple Rare Muscle Diseases Resolaris Program

  14. Slide 14: Rare Myopathies Have an Immune Component

    Rare Myopathies Have an Immune Component Chronic damage, homeostasis disrupted Genetic Mutation Inappropriate proteins in muscle Mutated dysferlin proteins in muscle Mutated dystrophin proteins in muscle FSHD LGMD2B DMD Aberrant Protein Expression Localized T Cell Invasion/Engagement Untapped therap

  15. Slide 15: Resolaris Program Snapshot

    Resolaris Program Snapshot Patients Rare Myopthies with an Immune Component Therapeutic concept Upregulate naturally occurring homeostatic pathway involving immune cells Target Resokine pathway: activated T-cell Rationale Functional knockout in humans & rodents results in increased muscle damage Mol

  16. Slide 16: Resolaris Clinical Data from Three Phase 1/2a Clinical Trials

    Resolaris Clinical Data from Three Phase 1/2a Clinical Trials Signals of clinical activity (improved muscle function) in patients n = 4 n = 2 n = 4 n = 8 n = 9 Overall Mean MMT Change Week 14 by Dose Group FSHD & LGMD2B Patients From 002, 003, 004 Trials Mean Change from baseline (%) Decrease Muscle

  17. Slide 17: iMod.Fc Program

    Lung Physiocrine Engineered to Treat Multiple Pulmonary Diseases iMod.Fc Program

  18. Slide 18: Interstitial Lung Disease

    Interstitial Lung Disease Severe tissue remodeling Resokine Promotes Lung Homeostasis Epithelial damage IL-13, TGFβ, TNF, IL-1β Resokine Therapy to “Cool Down” Immune System Pharmacologic restoration of tissue homeostasis and resolution of immune engagement Natural restoration of tissue homeostasis

  19. Slide 19: Interstitial Lung Diseases Share Immune Engagement

    Connective Tissue Diseases (CTDs) Occult CTD + Serologies Idiopathic Pulmonary Fibrosis (IPF) Constant Immune Engagement: Acute & Chronic Sarcoidosis Chronic Hypersensitivity Pneumonia Non-Specific Interstitial Pneumonia Level of Fibrosis Interstitial Lung Diseases Shared Immune Engagement Significa

  20. Slide 20: Pathophysiological Role of T Cells in ILD

    Pathophysiological Role of T Cells in ILD Idiopathic Pulmonary Fibrosis Hypersensitivity Pneumonitis Sarcoidosis Prasse et al. Clin Exp Immunol 2000 Daniil et al. Resp Research 2005 Arranz, et al. Eur Resp J 2016 T Cells Correlated with Negative Outcomes Percentage of lymphocytes in pulmonary lavage

  21. Slide 21: iMod.Fc Outperforms Current Treatment

    *The Ashcroft scale for the evaluation of bleomycin-induced lung fibrosis is the analysis of stained histological samples by visual assessment **Bleomycin mouse model abstract presented as a poster at the American Thoracic Society in May 2017 Improvement in Ashcroft Score (%)* TGF β Ab 3mg/kg IP QOD

  22. Slide 22: iMod.Fc Returns Breathing to Normal

    ***P ≤ 0.001; ****P < 0.0001; ns = not significant Respiratory Minute Volume = amount of air inhaled/exhaled/min Nintedanib dosed daily iMod.Fc Returns Breathing to Normal Respiratory Minute Volume iMod.Fc iMod.Fc iMod.Fc outperformed Nintedanib (SOC for IPF) in the respiratory mouse model at lower

  23. Slide 23: iMod.Fc Program Snapshot

    iMod.Fc Program Snapshot Patients Interstitial Lung Diseases, including IPF Therapeutic concept Upregulate naturally occurring homeostatic pathway involving immune cells Target Resokine pathway: activated T-cell Rationale Functional knockout in humans & rodents results in lung damage Molecular entit

  24. Slide 24: iMod.Fc Phase 1/2a Program Current Plan

    Phase 2a Potential Patient Analysis: BALF Imaging: HRCT, PET Disease Biomarkers: ACE, IL-2R, Neopterin, Resokine PD Assay iMod.Fc Phase 1/2a Program Current Plan Program Overview (Final trial designs subject to approval of regulatory authorities) Randomized, Double-Blind, Placebo-Controlled Studies

  25. Slide 25: Resokine Cancer: Promoting Tumor Homeostasis

    By Hijacking a 400 Million Year Old Pathway, Resokine Cancer Promoting Tumor Homeostasis

  26. Slide 26: Resokine: Potential Key Regulator of Tissue & Tumor Homeostasis

    Resokine: Potential Key Regulator of Tissue & Tumor Homeostasis Cancer homeostasis follows homeostasis evolution tRNA Synthetase Physiocrines *Resokine, CTLA-4, PD-1 timeline for when >70% sequence identity Guo et al. Nature 2010; Science 2017; Science 2007; Nature 2002; Nature 2010; Genome Research

  27. Slide 27: Project ORCA: Resokine Antagonists

    B Project ORCA: Resokine Antagonists Activating T Cells “Turning Up the Heat” To Disrupt Tumor Homeostasis

  28. Slide 28: Higher Resokine Levels in Tumors: Colder Immune System

    Higher Resokine Levels in Tumors: Colder Immune System at the Tumor Adapted from graphic from Chen et al 2017 Tolerance Suppression Immunity Inflammation Immune Cell Population n 2 Increases the local tumor requirement for immune cell activation/ engagement 1 Tumor “highjacks” the primal homeostatic

  29. Slide 29: Setting Lower Resokine Levels in Cancer Patients

    Setting Lower Resokine Levels in Cancer Patients in Tumors: Hotter Immune System at the Tumor Adapted from graphic from Chen et al 2017 Tolerance Suppression Immunity Inflammation Immune Cell Population n 1 Potential to therapeutically disrupt cancer homeostasis 2 Target Resokine Pathway 3 With an a

  30. Slide 30: ORCA: Development Highlights & Status

    ORCA: Development Highlights & Status Development Highlights Status Resokine over expressed in all cancers tested to date Over 10 tumor types tested; >300 patient samples tested; ≥95% of patients tested positive for Resokine Human evidence of Ab blockade; changes T cell behavior Anti-synthetase synd

  31. Slide 31: Building a New Class of Therapeutics For Patients

    Building a New Class of Therapeutics For Patients Foundation for the Future

  32. Slide 32: LIFE Leaders

    LIFE Leaders Andrea Cubitt, Ph.D. VP, Product Protection John Blake, CPA SVP, Finance Sanjay Shukla, M.D. Chief Medical Officer Holly D. Chrzanowski VP, Enterprise Talent and Organization Ashraf Amanullah, Ph.D. VP, Manufacturing John Mendlein, Ph.D. Chief Executive Officer Sanuj Ravindran, M.D. Chi

  33. Slide 33: LIFE Corporate Goals and Financial Update

    LIFE Corporate Goals and Financial Update Corporate Goals Advance Pipeline with Two Molecules in the Clinic iMod.Fc scheduled to commence Phase 1 in 2017 Declare 3rd IND Candidate ORCA on track to declare an IND candidate in 2017 Partner One or More Wholly-Owned Programs Active discussions ongoing (

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